Malta payroll for employers: FSS income tax withholding (methods, cumulative formula, FS4 status tables), Class 1 social security and the Maternity Leave Fund, qualifying overtime tax, minimum wage and cost-of-living increase, statutory bonuses, and the FS5, FS3 and FS7 filing deadlines and penalties.
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| Step | Formula | Meaning |
|---|---|---|
| 1 | A = (E/C) N | Projected annual emoluments: main emoluments to date (E) ÷ current pay period number (C) × pay periods in the year (N) |
| 2 | P | Projected annual tax: apply the article 56(1)(a) or (b) table for the FS4 status to A |
| 3 | D = (P/N) C | Tax due to date |
| 4 | L = D − X | Deduct this period: tax due to date less tax already deducted (X) |
This Guide covers what a Maltese employer (a "payer") must do for employees (the "payees"): register, withhold income tax under the Final Settlement System (FSS), pay Class 1 social security and the Maternity Leave Fund contribution, pay the statutory bonuses and the minimum wage, and file the FS5, FS3 and FS7.
Sources. Everything here comes from the Laws of Malta (legislation.mt). The MTCA website (mtca.gov.mt) refused our automated source checks on 25 September 2026. Anything that exists only there is marked check, with no figure. That covers the FSS Main Tax Deduction Tables, the FS-form layouts and e-filing rules, the 2026 Class 1 weekly caps, and the statutory bonus amounts.
Not covered: the employee's own tax return, part-time final tax and personal reliefs (see the malta-income-tax Guide), self-employed Class 2 contributions, fringe-benefit valuation, the special expatriate regimes (highly qualified persons and similar), and sector Regulation Orders beyond what is named here.
Order matters. If you compute tax before splitting out qualifying overtime and part-time pay, those amounts are taxed twice. If you compute Class 1 on gross pay including bonuses and overtime, you overcharge both sides.
Payers "having ten or more full-time payees" must use the FSS Main Cumulative Tax Deduction Formula. For each pay period:
| Step | Formula | Meaning |
|---|---|---|
| 1 | A = (E/C) N | Projected annual emoluments: main emoluments to date (E) ÷ current pay period number (C) × pay periods in the year (N) |
| 2 | P | Projected annual tax: apply the article 56(1)(a) or (b) table for the FS4 status to A |
| 3 | D = (P/N) C | Tax due to date |
| 4 | L = D − X | Deduct this period: tax due to date less tax already deducted (X) |
If L is negative, deduct nothing that period. The deduction may not exceed 50% of the cash part of the period's pay.
Main Tax Deduction Tables (fewer than ten full-time payees). The tables are the ones "the Commissioner may ... declare to be applicable" in a communication, circular or on a Government website. They are not in the law, so the 2026 tables are check on mtca.gov.mt. A year-end adjustment is normally made in the last pay period: projected annual tax on actual year-to-date main emoluments, less tax already deducted. The payer can do this only with full information, which includes FS3s from earlier employers that year.
Tax = chargeable income × rate − subtraction. Act III of 2026, article 19, replaced article 56(1)(a) and (b) from year of assessment 2027. Each band is "exceeds [lower] but is less than [upper]". The formulas give the same tax at each band edge.
| FS4 status (article 56(1)) | 0% up to | 15% band (subtract) | 25% band (subtract) | 35% over €60,000 (subtract) |
|---|---|---|---|---|
| Single / other individual, (b)(i) | €12,000 | €12,000–€16,000 (€1,800) | €16,000–€60,000 (€3,400) | €9,400 |
| Married, joint, (a)(i) | €15,000 | €15,000–€23,000 (€2,250) | €23,000–€60,000 (€4,550) | €10,550 |
| Parent, (b)(ii) | €13,000 | €13,000–€17,500 (€1,950) | €17,500–€60,000 (€3,700) | €9,700 |
| Married, 1 qualifying child, (a)(ii) | €17,500 | €17,500–€26,500 (€2,625) | €26,500–€60,000 (€5,275) | €11,275 |
| Married, 2+ qualifying children, (a)(iii) | €22,500 | €22,500–€32,000 (€3,375) | €32,000–€60,000 (€6,575) | €12,575 |
| Parent, 1 qualifying child, (b)(iv) | €14,500 | €14,500–€21,000 (€2,175) | €21,000–€60,000 (€4,275) | €10,270 (as enacted) |
| Parent, 2+ qualifying children, (b)(v) | €18,500 | €18,500–€25,500 (€2,775) | €25,500–€60,000 (€5,325) | €11,325 |
The €10,270 point. The enacted text says "subtracting €10,270". At €60,000 the 25% formula gives €10,725 but the 35% formula gives €10,730, a €5 step. A continuous table would subtract €10,275, which is what some payroll software uses. Apply the enacted figure unless MTCA has published a correction (check).
Who may use which status. A payer applies the status the FS4 declares. It still helps to know the conditions, because a wrong FS4 gives the employee a year-end bill.
2026 timing. Act III of 2026 was assented on 10 March 2026. The cumulative formula recalculates tax to date each period, so any January–February under- or over-deduction unwinds through L = D − X. How MTCA told payers to handle those months is check.
| Method | Applies to | Deduction |
|---|---|---|
| Overtime (rule 7A) | Qualifying overtime income | "fifteen cents (€0.15) of every one euro (€1)", final: not part of chargeable income, not creditable, not refundable |
| Other Emoluments (rule 9) | Second jobs and other emoluments not under rules 7 or 8 | "twenty per cent"; the payee may direct a higher rate. Pensioners and full-time students may direct nil or a lower rate; anyone else needs the Commissioner's written approval for a lower rate |
| Part-Time (rule 8) | Part-time work qualifying under article 90A and the Part-time Work Rules | Rate and cap: see malta-income-tax. A payee who expects to be under the tax threshold may direct no deduction on the FS4 |
Qualifying overtime. Overtime is qualifying only while "the rate of basic weekly wage for that employment does not exceed three hundred and seventy-five euro (€375) per week" and the post is not managerial (a director, partner or officer with managerial functions). It must be done in a full-time employment registered with Jobsplus. From year of assessment 2023 the 15% treatment covers overtime income up to the lower of "ten thousand euro (€10,000)" and actual qualifying hours × maxrate. Maxrate is the overtime hourly rate, capped at "twice the hourly equivalent of the basic weekly wage". The hourly equivalent is the basic weekly wage divided by forty. Overtime pay above the cap is not qualifying overtime income, so it is taxed with the other emoluments under the Main method. The payee may opt out in writing at any time (rule 7A(3)), or elect on the return to be taxed at normal rates with the 15% credited (rule 7A(6)). Each spouse's overtime is tested separately.
Who pays. For every person in insurable employment "three contributions per week shall be payable ... one by the employed person, one by his employer, and one out of the Consolidated Fund" (article 7(1)). The State's share is 50% of the combined employee and employer contribution. The employer is liable in the first instance for both its own and the employee's share (article 8(1)). It recovers the employee's share only by deduction from wages paid for that contribution week (article 8(3)). It must not deduct its own share from the employee: doing so is an offence (article 8(2)).
What it is charged on. The base is the "basic weekly wage", or the weekly equivalent of the basic monthly salary. That means gross wage or salary "excluding any remuneration for overtime, any form of bonus, any extra allowances, any remuneration in kind and commissions" (article 2). A person with two insurable jobs is treated as employed in the one with the higher basic wage (article 7(1) proviso). The Tenth Schedule does not say how to turn a monthly salary into a weekly equivalent. Use the conversion MTCA prescribes (check).
Rate and categories. Both the employee and the employer pay 10% of the basic weekly wage, "calculated to the nearest cent", between a low-wage flat rate and a weekly maximum (Tenth Schedule, Part I). The maximum is higher for people born on or after 1 January 1962 because their pensionable income is higher.
| Category | Who | Employee | Employer |
|---|---|---|---|
| A | Under 18, basic wage at or below the Category A/B threshold | flat rate | same |
| B | 18 or over, basic wage at or below the threshold | flat rate, or 10% if eligible and elected | flat rate |
| C | Basic wage between the threshold and the Category D point (the band is higher for those born 1962 or later) | 10% of basic weekly wage | 10% of basic weekly wage |
| D | Basic wage above the Category D point | fixed maximum (higher for born 1962 or later) | same |
| E / F | Under 18 / over 18 on recognised student-worker or similar schemes | 10%, capped | 10%, capped |
2026 weekly figures: check. The thresholds and flat and maximum amounts change each year. The Tenth Schedule on legislation.mt still carries the table substituted by L.N. 10 of 2025, backdated to 1 January 2024. Its Note 2 refers to pensionable income that "with effect from January 2024 is guaranteed at the amount of €27,679.09". That table sets Category B at "€21.35", the threshold at "€213.54", and Category D at "€42.31" (born 1961 or before) and "€53.23" (born 1962 or later). These are 2024 figures. Do not use them for 2026 pay. We found no legal notice updating Part I for 2025 or 2026 among the 2026 legal notices published to date. Take the 2026 weekly rates from MTCA's published Class 1 table.
Low earners. An employee whose basic weekly earnings are below the national minimum wage for age 18+ may elect to pay 10% of the actual basic weekly wage instead of the Category B flat rate. From 1 January 2018 this is limited to part-time employees whose part-time basic earnings do not exceed the National Minimum Wage (article 7(2)(a)). Paying less than the flat rate "may ... result in the payment of a reduced contributory benefit or contributory pension" (Tenth Schedule, Note 1). From 1 January 2022, a person with more than one part-time job and no full-time job may elect to pay on all part-time jobs up to forty hours a week.
Change of employer mid-week. If employment ends with one employer and starts with another in the same week, the former employer pays that week's contribution (article 7(3)).
Maternity Leave Fund (employer only). The employer also pays "0.3% calculated to the nearest cent of their basic weekly wage", with flat amounts at the bottom and a cap at Category D (Tenth Schedule, Part IV). The 2024-dated table caps it at "€1.60" (born 1962 or later) and "€1.27" (born 1961 or before). The 2026 caps are check. Nothing is deducted from the employee for this.
Late Class 1. From 1 January 2026, the extra contribution for Class 1 paid late or at the wrong rate under article 116(1)(c) and (d) is replaced by interest at the article 44(2A) Income Tax Management Act rate (Act III of 2026, article 27). See the malta-income-tax Guide for that rate.
| Age | Weekly minimum (normal working week) |
|---|---|
| 18 and over | €229.44 |
| 17 | €222.66 |
| Under 17 | €219.82 |
Part-time employees get the hourly rate of a comparable whole-time employee under the relevant Wage Regulation Order. Where no Order applies, the rate is at least the weekly minimum "divided by forty (40)". For age 18 and over that is €5.736 an hour. Where a sector Order applies, 2026 wages may not be less than its 2025 wages adjusted for the cost-of-living increase. The mandatory service supplements (after one and two years with the same employer) in the older order, S.L. 452.71, are not repeated in L.N. 289 of 2025. Check with the Department for Industrial and Employment Relations whether they still apply.
From 1 January 2026, "The wages of whole-time employees shall be increased by four euro and sixty-six cents (€4.66) per week". Part-time hourly rates rise by the matching hourly amount. Where there is no comparable whole-time employee or Wage Regulation Order, the rise is one-fortieth of €4.66. The increase is part of wages. It is taxable under FSS and forms part of the basic weekly wage for Class 1. It is a different thing from the statutory bonuses and income supplements below. Those are separate lump-sum payments made on top of wages at fixed times of the year.
| Situation | Rule | Source |
|---|---|---|
| No FS4 from the payee | Deduct at the article 56(1) maximum (35%) until the default ends. Payer still files the form | FSS rule 3(2), (4), (5) |
| FS4 returned as unacceptable and not corrected within fourteen days | Deduct at the maximum rate until the Commissioner directs otherwise | FSS rule 3(7) |
| Payer files an FS4 late, incomplete or wrong | Schedule C additional tax, plus liability for any under-deduction not recovered by 31 December | FSS rule 3(6) |
| Ten or more full-time payees | Cumulative formula compulsory. Fewer than ten: may opt for Tables, but not both in one year | FSS rule 7(4) |
| More than one employment | Only one source can be "main". Others go under Other Emoluments at 20% | FSS rules 7(1), 9 |
| Deduction would exceed 50% of cash pay | Limit to 50% unless the payee consents, or articles 46 or 71 ITMA apply | FSS rule 11 |
| Termination payment | Taxed under rule 6 and/or rule 10, with no 50% limit | FSS rule 34 |
| Employer pays the employee's tax (net pay deal) | Gross up: emoluments = net pay + tax paid | FSS rule 33 |
| Any agreement not to deduct tax | Null and void (except rule 33 arrangements) | FSS rule 36 |
| Payer failed to deduct but has paid the tax | May recover only that amount from the payee, as the Commissioner approves | FSS rule 16 |
| Over-deduction remitted | Payer repays the payee from its own funds, then sets it off on the next remittance or claims a refund | FSS rule 17 |
| Basic weekly wage over €375, or managerial post | Overtime is not qualifying. Tax it under the Main method | S.L. 123.200 rule 2 |
| Payee paid after death, or after the contract ended | Deduction rules still apply | FSS rule 12 |
| Employer tries to recover its own Class 1 share | Offence | Cap. 318 art. 8(2) |
Case 1: single employee, cumulative formula. Basic salary €2,500 a month, FS4 status single, twelve monthly pay periods, no other pay. Month 1: A = (2,500 / 1) × 12 = €30,000. P = 30,000 × 25% − 3,400 = €4,100. D = (4,100 / 12) × 1 = €341.67, which rounds up to €342. Month 2: D = (4,100 / 12) × 2 = €683.33. L = 683.33 − 342 = €341.33, which rounds down to €341.
Case 2: same pay, married joint status. P = 30,000 × 25% − 4,550 = €2,950. Month 1 D = €245.83, which rounds to €246. Over the year the married status saves €1,150 against single (€4,100 − €2,950).
Case 3: no FS4. Same €2,500 monthly pay, and the employee has not handed in an FS4. Deduct 35% = €875. That is under the 50% cap (€1,250), so deduct it in full. File the FS4 to the best of your knowledge anyway.
Case 4: qualifying overtime. Full-time, Jobsplus-registered, non-managerial employee on a basic weekly wage of €360. They work 40 overtime hours in the month at €13.50 an hour, so overtime pay is €540. Hourly equivalent of basic = 360 / 40 = €9.00, and maxrate is capped at 2 × 9 = €18.00. The €13.50 rate is within the cap, and the year's qualifying overtime is under €10,000. Deduct 15% = €81.00 as a final tax. Report the €540 and the hours separately on the FS5 and FS3. The €540 is kept out of the Main formula.
Case 5: Class 1 and Maternity Fund. Employee born in 1990, basic weekly wage €400. We assume this falls within the 2026 Category C band (check the 2026 table; it was inside Category C even in the 2024-dated table). Employee Class 1 = 10% × 400 = €40.00. Employer Class 1 = €40.00. Maternity Leave Fund = 0.3% × 400 = €1.20. The employer's weekly cost on top of wages is €41.20, and €40.00 is deducted from pay.
Case 6: parent, one qualifying child, high earner. Projected annual emoluments €70,000. As enacted, P = 70,000 × 35% − 10,270 = €14,230. With the "continuous" €10,275 it would be €14,225. Record which figure your software uses.
Case 7: second job. An employee whose main job is elsewhere earns €1,000 in a month from you. Other Emoluments method: deduct 20% = €200, unless the employee has directed a higher rate, or (as a pensioner or full-time student) a lower one.
| What | Who gets it | Deadline | Rule |
|---|---|---|---|
| Payer registration | Commissioner | Within fifteen days of the first emoluments starting to accrue | 4(1) |
| FS4 (Payee Status Declaration) | Payee → payer; payer files the original | Payee: within seven days of a new source or a change. Payer: last working day of the following month | 3(1), 3(3) |
| FS5 (monthly payment advice) with payment of tax deducted, including a nil advice | Commissioner | Last working day of the month after the month the emoluments were paid | 15(1), 20 |
| FS3 (Payee Statement of Earnings) | Payee (two copies) | By 31 January of the following year, or within seven days of termination | 21(1)(b) |
| FS7 (Payer's Annual Reconciliation Statement) with the original FS3s | Commissioner | By 15 February of the following year | 22(1) |
| FS7 when a payer stops paying emoluments | Commissioner | Last working day of the month after the last payment | 22(1) proviso |
The FS5 shows the number of payees and gross emoluments split into part-time, qualifying overtime and other pay. Fringe benefits are shown separately. Tax deducted is shown under each method, plus any arrears collected under rule 10. Class 1 contributions are collected "at the Malta Tax and Customs Administration" (Cap. 318, article 11, as amended by Act III of 2026, article 22). How they appear on the FS5 is check. The FS5 form layout and the e-filing duty are check, since the Commissioner may direct electronic payment and filing (rules 15(2) and 23).
Tax deducted is a debt to Government from the last working day of the following month. Late payment carries interest under article 44(2A) of the Income Tax Management Act (rule 25(1)).
FSS additional tax (Schedule C), "Subject to a maximum of €1000 for each default":
| Default | Additional tax |
|---|---|
| FS4 not submitted to the Commissioner as required | "€2 for every form not submitted", or €23 whenever the defaults in any one month do not exceed ten |
| Failure to register or re-register as a payer | €115 |
| Monthly payment advice (FS5) not filed on time or in the right manner | €15 |
| Annual reconciliation (FS7) with FS3 originals not filed | €200 |
The Commissioner serves a default notice. The payer must rectify and pay "within ten days", and may contest by letter within ten days. Each further notice for a continuing default doubles the additional tax, up to the cap (rule 24). The Commissioner may remit it if the default was not the payer's fault.
Records. Keep an up-to-date record for each payee with name, address and ID or tax number, date of payment, gross pay (fringe benefits shown separately), and tax deducted, monthly and cumulative. Keep it for the period in article 23(12) of the Income Tax Management Act (rule 18).
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